Index of /download/chromosomal_feature_files/A_fumigatus_Af293

Icon  Name                                                          Last modified      Size  Description
[DIR] Parent Directory                                                                   -   
[TXT] A_fumigatus_Af293_version_s03-m02-r04_chromosomal_feature.tab 13-May-2012 08:32  2.7M  
[DIR] archive/                                                      13-May-2012 08:32    -   
[   ] latest.gz                                                     13-May-2012 08:32  510K  

Aspergillus Genome Database A_fumigatus_Af293_version_sXX-mYY-rZZ_chromosomal_feature.tab file

This tab-delimited file contains information about A. fumigatus chromosomal
features in AspGD.  Please note that features are included if they 
were present in the latest version of the annotation.  
This file is updated weekly (Sunday evening).

The notation "sXX-mYY-rZZ" in the filename indicates the genome version to which data in 
the file corresponds. The versioning ssytem used at AspGD for A. fumigatus is based on 
the system used for A. nidulans.  Detailed explanation about the genome version can 
be found at: http://www.aspgd.org/help/SequenceHelp.shtml#Anids_versions 


Columns within the chromosomal_features.tab:

1.  Feature name (mandatory); this is the primary name
2.  Gene name (locus name), if available
3.  Aliases (multiples separated by |)
4.  Feature type
5.  Chromosome
6.  Start Coordinate
7.  Stop Coordinate
8.  Strand 
9.  Primary AspGDID
10. Secondary AspGDID (if any)
11. Description
12. Date Created
13. Sequence Coordinate Version Date (if any)
14. Blank
15. Blank
16. Date of gene name reservation (if any).
17. Has the reserved gene name become the standard name? (Y/N)
18. Name of S. cerevisiae ortholog(s) (multiples separated by |)

Note: Column 2 contains reserved gene names as well
as standard gene names. 

Note: Genes that have been deleted from the current reference annotation 
set are not included in this file.


The file "latest" is a gzipped version of the latest
A_nidulans_FGSC_A4_version_sXX-mYY-rZZ_chromosomal_feature.tab file.


URL: http://www.aspgd.org/
Contact: http://www.aspergillusgenome.org/cgi-bin/suggestion
Funding: grant RO1 AI077599 from the NIAID at the NIH.