Index of /download/domains/OtherStrains
Name Last modified Size Description
Parent Directory -
A_clavatus_NRRL_1_iprscan.out 14-Jan-2013 11:37 12M
A_flavus_NRRL_3357_iprscan.out 14-Jan-2013 11:37 14M
A_fumigatus_A1163_iprscan.out 01-Apr-2013 11:02 12M
A_niger_ATCC_1015_iprscan.out 14-Jan-2013 11:37 14M
A_terreus_NIH2624_iprscan.out 14-Jan-2013 11:37 12M
N_fischeri_NRRL_181_iprscan.out 14-Jan-2013 11:37 14M
The download/domains/OtherStrains directory contains conserved
protein domain/motif information for several Aspergillus-related
strains.
Protein domains were predicted using IprScan software from the InterPro
database. For more information about the InterPro database and
for help interpreting IprScan output, see:
ftp://ftp.ebi.ac.uk/pub/software/unix/iprscan/README.html
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The following tab-delimited text files contain the output of a search
of all translated ORF sequences in the indicated Aspergillus-related
strain using the IprScan program:
A_clavatus_NRRL_1_iprscan.out
A_flavus_NRRL_3357_iprscan.out
A_fumigatus_A1163_iprscan.out
A_niger_ATCC_1015_iprscan.out
A_terreus_NIH2624_iprscan.out
N_fischeri_NRRL_181_iprscan.out
The columns in each file contain the following data:
1. Systematic identifier of the input sequence
2. crc64 (unique checksum) of the sequence
3. Length of the sequence (in amino acids)
4. Analysis method
5. Source database entry for this match
6. Source database description for the entry
7. Start coordinate of the domain match
8. End coordinate of the domain match
9. E-value of the match (reported by analysis method)
10. Status of the match (T: true; ?: unknown)
11. Date of the IprScan run
12. InterPro domain identifier
13. InterPro domain description
14. GO (gene ontology) description for the InterPro domain
These files are updated upon new releases of InterPro domain definitions
or updates to the IprScan program.