Index of /download/sequence/A_fumigatus_Af293/current

 Name                                                                       Last modified      Size  Description
 Parent Directory                                                                                -   
 A_fumigatus_Af293_version_s01-m04-r13_chromosomes.fasta.gz                 29-Jan-2012 15:08  8.4M  GZIP compressed docume>
 A_fumigatus_Af293_version_s01-m04-r13_not_feature.fasta.gz                 29-Jan-2012 21:54  3.9M  GZIP compressed docume>
 A_fumigatus_Af293_version_s01-m04-r13_orf_coding.fasta.gz                  29-Jan-2012 18:30  5.0M  GZIP compressed docume>
 A_fumigatus_Af293_version_s01-m04-r13_orf_genomic.fasta.gz                 29-Jan-2012 16:40  5.6M  GZIP compressed docume>
 A_fumigatus_Af293_version_s01-m04-r13_orf_genomic_1000.fasta.gz            29-Jan-2012 15:55   12M  GZIP compressed docume>
 A_fumigatus_Af293_version_s01-m04-r13_orf_trans_all.fasta.gz               29-Jan-2012 20:21  3.5M  GZIP compressed docume>
 A_fumigatus_Af293_version_s01-m04-r13_other_features_genomic.fasta.gz      29-Jan-2012 20:23  7.1K  GZIP compressed docume>
 A_fumigatus_Af293_version_s01-m04-r13_other_features_genomic_1000.fasta.gz 29-Jan-2012 20:22  121K  GZIP compressed docume>
 A_fumigatus_Af293_version_s01-m04-r13_other_features_no_introns.fasta.gz   29-Jan-2012 20:24  6.6K  GZIP compressed docume>
 EMBL_format/                                                               31-Jan-2012 19:11    -   

This directory contains the current version of Aspergillus fumigatus Af293
genomic sequences.

The notation "sXX-mYY-rZZ" in the filename indicates the genome version to which data in 
the file corresponds. Detailed explanation can 
be found at: http://www.aspgd.org/help/SequenceHelp.shtml


Sequenced by JCVI/Sanger Institute/Institut Pasteur. Sequence and annotation originally downloaded from the Broad Institute Aspergillus download page on 23-Feb-2009.

* Chromosomal sequence:
                A_fumigatus_Af293_sXX-mYY-rZZ_chromosomes.fasta.gz

* Sequence with no introns for all ORFs:
                A_fumigatus_Af293_sXX-mYY-rZZ_orf_coding.fasta.gz

* Sequence with introns for all ORFs:
                A_fumigatus_Af293_sXX-mYY-rZZ_orf_genomic.fasta.gz

* Sequence with introns and untranslated region 1000 bp upstream and
downstream for all ORFs:
                A_fumigatus_Af293_sXX-mYY-rZZ_orf_genomic_1000.fasta.gz

* Translation of all ORFs:
                A_fumigatus_Af293_sXX-mYY-rZZ_orf_trans_all.fasta.gz

* Sequence of other genomic features, including introns (if any):
                A_fumigatus_Af293_sXX-mYY-rZZ_other_features_genomic.fasta.gz
Note: Currently for Aspergillus fumigatus Af293, only some non-ORF feature types have been annotated

* Sequence of the above genomic features, with introns (if any) removed:
                A_fumigatus_Af293_sXX-mYY-rZZ_other_features_no_introns.fasta.gz

* Sequence of the above genomic features, plus region 1000 bp upstream and downstream:
                A_fumigatus_Af293_sXX-mYY-rZZ_other_features_genomic_1000.fasta.gz

* Sequence between annotated chromosomal features:
                A_fumigatus_Af293_sXX-mYY-rZZ_not_feature.fasta.gz
Note: Features excluded from this file include:
                Protein Coding Sequence
                misc_RNA
                misc_feature

The files in this directory are in FASTA format.

All files are gzip compressed. There are several freely available
software options for decompressing gzipped files.  The software 
and other useful information is available on these web sites:
- WinZip (http://www.winzip.com/)
- Stuffit (http://www.stuffit.com/)
- Gzip (http://www.gzip.org/

and the gzip user's manual:
http://www.math.utah.edu/docs/info/gzip_toc.html

Additional sequence documentation is found on the AspGD web site at:
http://www.aspergillusgenome.org/help/SequenceHelp.shtml

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